The first DReSNet face to face meeting agreed to set up a catalogue of active Data Repositories to help us to create an ontology of E-Science Digital Repositories, and to circumscribe the issues and activities that we want to focus on.
The repositories represented in this catalogue could be international BioScience Gene databases, or lab- or project-specific repositories or even Institutional Repositories with a significant data holding. The important criteria are
- a significant data is stored in the environment
- it is accessible through some well specified means
- data is collected from (or deposited by) users.
This would rule out POWS (plain old web sites), institutional repositories containing a handful of Excel files, third-party aggregations or republished data portals.
Nominations for addition to this list can be emailled to Les Carr.
- eCrystals Southampton
- Archive for Crystal Structures generated by the Southampton Chemical Crystallography Group and the EPSRC UK National Crystallography Service.
- http://ecrystals.chem.soton.ac.uk/
- 375 records
- Deposit interface: private (EPrints login)
- Access interface: web pages + OAI-PMH + RSS feed
- WorldWideMolecularMatrix Collection at Cambridge Institutional Repository
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This collection will contain the calculated properties of over 200,000 Open molecules provided by the US National Cancer Institute (NCI), using semi-empirical quantum-mechanical methods. Properties include heat of formation, 3-dimensional structure, dipole moment and ionization potential. Each molecule, in Chemical Markup Language (CML) is in a separate entry indexed by NSC number (NCI).
- http://www.dspace.cam.ac.uk/handle/1810/724
- 175356 records
- Deposit interface: private (DSpace login)
- Access interface: web pages + OAI-PMH